NEBNext® Enzymatic Methyl-seq v2 Conversion Module

Catalog # Concentration Size List Price Quantity Your Price
E8020L 96 reactions $996.00
$896.40
E8020S 24 reactions $273.00
$245.70
Catalog # Size List Price Your Price
E8020L 96 reactions $996.00
$896.40
E8020S 24 reactions $273.00
$245.70
Catalog #
Qty:
 
*On-line ordering is for Canadian customers only. Web pricing is applicable only to orders placed online at www.neb.ca

NEBNext Enzymatic Methyl-seq (EM-seq™) is a high-performance enzyme-based alternative to bisulfite conversion for the identification of 5mC and 5hmC. Unlike bisulfite conversion, this highly efficient method minimizes DNA damage, resulting in superior detection of methylated cytosines, with fewer sequencing reads.

The new NEBNext Enzymatic Methyl-seq v2 Conversion Module has a wider input range (as low as 100 pg) than the original EM-seq Conversion Module (NEB #E7125).

For use in Illumina® sequencing workflows, we recommend use of the NEBNext Enzymatic Methyl-seq v2 Kit (NEB #E8015) instead of this module. The full kit includes the EM-seq Adaptor, which has been optimized for high performance in the EM-seq workflow, as well as the high-efficiency NEBNext Ultra™ II library prep reagents, and these components are not included in the Conversion Module.

For specific detection of 5hmC, the NEBNext Enzymatic E5hmC-seq Conversion Module (NEB #E3365) is also available.

View or download extensive EM-seq v2 performance data in our Data Supplement.

 

View or download extensive EM-seq v2 performance data in our Data Supplement.

The NEBNext Enzymatic Methyl-seq v2 Conversion Module provides a high-performance enzyme-based alternative to bisulfite conversion for methylome analysis, with as little as 100 pg of input DNA.
EM-seq is a two-step enzymatic conversion process to detect modified cytosines. In the first step, TET2 and T4-BGT protect modified cytosines from downstream deamination. TET2 enzymatically oxidizes 5mC and 5hmC, and T4-BGT glucosylates 5hmC.

 

The second enzymatic step uses APOBEC to deaminate unmodified cytosines to uracils, but 5mC and 5hmC protected in the first step are not deaminated.

For specific detection of 5hmC, the NEBNext Enzymatic E5hmC-seq Conversion Module (NEB #E3365) is also available.

Figure 1: EM-seq™ conversion method

Diagram showing sodium bisulfite conversion method versus EM-seq conversion method

The EM-seq™ v2 workflow accommodates a wider input range than the original EM-seq workflow, with a 100-fold lower minimum input amount.

 

Reagents Supplied

The following reagents are supplied with this product:

NEB # Component Name Component # Stored at (°C) Amount Concentration
  Control DNA CpG methylated pUC19 E7122AVIAL -20 1 x 0.024 ml 0.1 ng/µl
  Control DNA CpG unmethylated Lambda E7123AVIAL -20 1 x 0.024 ml 2 ng/µl
  NEBNext® Carrier DNA E3351AVIAL -20 1 x 0.024 ml
  Elution Buffer E7124AVIAL -20 1 x 2.1 ml
  TET2 Reaction Buffer E7126AVIAL -20 1 x 0.3 ml
  TET2 Reaction Buffer Supplement (x 1) E8013AVIAL -20 3 x 100 µl
  UDP-Glucose E3353AVIAL -20 1 x 0.024 ml
  DTT E7139AAVIAL -20 1 x 0.5 ml 100 mM
  T4-BGT E3354AVIAL -20 1 x 0.024 ml
  T4-BGT Diluent E8014AVIAL -20 1 x 0.216 ml
  TET2 E7130AVIAL -20 1 x 0.096 ml
  Fe (II) Solution E7131AVIAL -20 1 x 0.024 ml
  Stop Reagent E7132AVIAL -20 1 x 0.024 ml
  APOBEC E7133AVIAL -20 1 x 0.024 ml
  Deamination Reaction Buffer E3356AVIAL -20 1 x 0.096 ml
  Recombinant Albumin E3357AVIAL -20 1 x 0.024 ml
  Control DNA CpG methylated pUC19 E7122AAVIAL -20 1 x 0.096 ml 0.1 ng/µl
  Control DNA CpG unmethylated Lambda E7123AAVIAL -20 1 x 0.096 ml 2 ng/µl
  NEBNext® Carrier DNA E3351AAVIAL -20 1 x 0.096 ml
  Elution Buffer E7124AAVIAL -20 1 x 8.6 ml
  TET2 Reaction Buffer E7126AAVIAL -20 1 x 1.2 ml
  TET2 Reaction Buffer Supplement (x 1) E8013AAVIAL -20 3 x 400 µl
  UDP-Glucose E3353AAVIAL -20 1 x 0.096 ml
  DTT E7139AAVIAL -20 1 x 0.5 ml 100 mM
  T4-BGT E3354AAVIAL -20 1 x 0.096 ml
  T4-BGT Diluent E8014AAVIAL -20 1 x 0.864 ml
  TET2 E7130AAVIAL -20 1 x 0.384 ml
  Fe (II) Solution E7131AAVIAL -20 1 x 0.096 ml
  Stop Reagent E7132AAVIAL -20 1 x 0.096 ml
  APOBEC E7133AAVIAL -20 1 x 0.096 ml
  Deamination Reaction Buffer E3356AAVIAL -20 1 x 0.384 ml
  Recombinant Albumin E3357AAVIAL -20 1 x 0.096 ml
An exception occurred during the operation, making the result invalid. Check InnerException for exception details.

Quality Control Assay
Quality Control tests are performed on each new lot of NEB product to meet the specifications designated for it. Specifications and individual lot data from the tests that are performed for this particular product can be found and downloaded on the Product Specification Sheet, Certificate of Analysis, data card or product manual. Further information regarding NEB product quality can be found here.
Specifications
The Specification sheet is a document that includes the storage temperature, shelf life and the specifications designated for the product. The following file naming structure is used to name these document files: [Product Number]_[Size]_[Version]
Certificate of Analysis
The Certificate of Analysis (COA) is a signed document that includes the storage temperature, expiration date and quality controls for an individual lot. The following file naming structure is used to name these document files: [Product Number]_[Size]_[Version]_[Lot Number]
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This product is intended for research purposes only. This product is not intended to be used for therapeutic or diagnostic purposes in humans or animals.

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