NEBNext® Primers for Epigenetics (Unique Dual Index Set 3) includes 96 unique pairs of i5 and i7 index primers optimized for NEBNext epigenetics workflows, including NEBNext E5hmC-seq™, with Illumina® sequencing. The primers enable incorporation of unique index pairs during library amplification and have been designed to minimize index hopping.
Indices are incorporated during PCR using these Unique Dual Index primer pairs that have been optimized for NEBNext epigenetics workflows, including E5hmC-seq. These primers enable multiplexing and have been designed to minimize index hopping. They are supplied as premixed i5 and i7 8-base index primers in 96 wells of a plate that has a pierceable foil seal for easy, single use.
The index sequences from the NEBNext Primers for Epigenetics (Unique Dual Index Set 3) (NEB #E3404S) and the 24-reaction NEBNext Primers for Epigenetics (Unique Dual Index Set 2B) (NEB #E3392S) are compatible, and can be combined to multiplex up to 120 reactions.
Please refer to the NEBNext Enzymatic 5hmC-seq Kit manual (NEB #E3350) for use of the NEBNext Primers for Epigenetics.
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